Beginning of main content
Trip Type
Flight 1
Flight 2
Flight 3
Flight 4
Flight 5

Search 590,000 properties worldwide.

Search over a million flights, hotels, packages, and more

No Expedia cancellation fee to change or cancel almost any hotel reservation.


Featured Shinjuku 3 Star Hotels

See all 1,303 Hotels in Shinjuku
APA Hotel Shinjuku Kabukicho Tower

APA Hotel Shinjuku Kabukicho Tower

1-20-2 Kabukicho, Tokyo
3.5 out of 5.0
3.9 out of 5 (2,741 reviews)
Another Excellent Stay Typical Japanese business hotel on the edge of the Kabukicho nightlife district. things can be a little crazy if you head into Kabukicho proper with the touts but normally there isn't an issue if you come down one of the quieter streets from Shinjuku JR Station.
  9 Feb 2018

£62

£62
Hotel Sunroute Plaza Shinjuku

Hotel Sunroute Plaza Shinjuku

2-3-1 Yoyogi, Tokyo
3.5 out of 5.0
4.3 out of 5 (6,850 reviews)
Great location, near to JR and shopping. Hotel room was decent in size considering it is right in the middle of everything. Staff were friendly and helpful, spoke good English.
  19 Feb 2018

£105

£105
Shinjuku Washington Hotel Main

Shinjuku Washington Hotel Main

3-2-9 Nishishinjuku, Tokyo
3.5 out of 5.0
3.8 out of 5 (1,019 reviews)
Nice hotel with Narita airport shuttle. Hotel is in walkable distance from Shinjuku station with underground passageway access. The only major disadvantage for the hotel is the lobby - not much seats at lobby considering the hotel size.
  19 Feb 2018

£87

£87
APA Hotel Shinjuku Gyoen-mae

APA Hotel Shinjuku Gyoen-mae

2-2-8 Shinjuku, Shinjuku, Tokyo
3.5 out of 5.0
3.9 out of 5 (1,378 reviews)
Convenient, but room is very smallThey do not have bellboy service, so you basically have to carry your stuff by your own. The room is very small even for 2 guests. We keep bumping into each other. Hotel staff are very friendly, but they are not able to speak english very well and a lot of things you have to settle on your own. They ...
  11 Feb 2018

£55

£55
Citadines Shinjuku Tokyo

Citadines Shinjuku Tokyo

1-28-13 Shinjuku, Shinjuku-ku, Tokyo
3.5 out of 5.0
4.5 out of 5 (1,322 reviews)
Great Place and location! Nice hotel that is very close to the subway and the beautiful park. Spacious for Tokyo standards. Very clean. Only complaint is that the pillows were very flat.
  5 Feb 2018

£71

£71
Haneda Excel Hotel Tokyu

Haneda Excel Hotel Tokyu

3-4-2 Haneda Airport Ota, Tokyo
3.5 out of 5.0
4.4 out of 5 (1,065 reviews)
Hotel being right in the airport is super convenient. I just rolled in with my car of suitcases and they took care of it. On my way out they got a airport cart to have me carry back out. Room is spacious and clean. Bed was quite a bit harder than I like.
  13 Feb 2018

£103

£103
E Hotel Higashi Shinjuku

E Hotel Higashi Shinjuku

2-3-15 Kabukicho, Tokyo
3.5 out of 5.0
3.8 out of 5 (3,125 reviews)
Good location for subwayNot quite in the middle of Shinjuku but nice and close to a metro station. And walking distance to Shinjuku central if you don't mind a little wander.
  19 Feb 2018

£53

£53
Hotel Mystays Haneda

Hotel Mystays Haneda

5-1-13, Haneda, Tokyo
3.5 out of 5.0
4.3 out of 5 (1,347 reviews)
Small and cosy stay, shuttle bus is punctual!Even though the room is small, we had a very comfortable stay.
  5 Feb 2018

£49

£49
HOTEL MYSTAYS PREMIER Akasaka

HOTEL MYSTAYS PREMIER Akasaka

2-17-54 Akasaka, Tokyo
3.0 out of 5.0
4.4 out of 5 (549 reviews)
A weekend in JapanI only had around 3 days to go around Japan. My 1st thought was " I will be walking a lot, so I don't want to carry my backpack with me all the time. I need a secure and friendly place, plus I want to come and be comfortable and have privacy" The MyStays premier hotel in Akasaka was great! Small ...
  29 Jan 2018

£54

£54
Hotel JAL City Haneda Tokyo

Hotel JAL City Haneda Tokyo

4-11 Haneda Asahi-cho, Ota-ku, Tokyo
3.5 out of 5.0
4.1 out of 5 (1,380 reviews)
Close to the airportRoom was small but very clean and served its purpose for an overnight stay. Couple of minutes drive by free hotel shuttle to the airport
  3 Feb 2018

£65

£65

3 stars in Shinjuku

Search for hotels in Shinjuku on Expedia. You can easily find your hotels in Shinjuku using one of the methods below:

  • View our selection of featured hotels in Shinjuku
  • Use the map to find hotels in the Shinjuku area you prefer
  • Use the filters to see hotels in a specific area of Shinjuku, select a specific theme, brand, or hotel class from basic (1 Star) to luxury hotels (5 Stars) in Shinjuku
  • Enter your travel dates to view the best deals on hotels in Shinjuku - while they last

Recently booked Shinjuku hotels

Shinjuku Kuyakusho-mae Capsule Hotel
1.5 out of 5.0
Last booking: 20 minutes ago
Hotel Gracery Shinjuku
4.5 out of 5.0
Last booking: 46 minutes ago
HUNDRED STAY Tokyo Shinjuku
4.5 out of 5.0
Last booking: 1 hour ago
City Hotel N.U.T.S.
3.0 out of 5.0
Last booking: 2 hours ago
Citadines Shinjuku Tokyo
3.5 out of 5.0
Last booking: 4 hours ago
Shinjuku Granbell Hotel
4.5 out of 5.0
Last booking: 5 hours ago
Nishitetsu Inn Shinjuku
3.5 out of 5.0
Last booking: 5 hours ago
Hotel Sunroute Higashi Shinjuku
3.5 out of 5.0
Last booking: 5 hours ago
ibis Tokyo Shinjuku
3.5 out of 5.0
Last booking: 5 hours ago