Search Hotels Near Mission Bay, San Diego

Most hotels are fully refundable. Because flexibility matters.

Save an average of 15% on thousands of hotels with Expedia Rewards

Search over 2.9 million properties and 550 airlines worldwide

Filter by

Popular filters
Popular filters
Guest rating
Guest rating
Property class
Payment type
Payment type
Property type
Property type
Area
Area
Popular locations
1
Popular locations
Meal plans available
Meal plans available
Amenities
Amenities
Accessibility
Accessibility
Traveller experience
Traveller experience

Top Trending Hotels Near Mission Bay

Aerial view
Paradise Point Resort & Spa
4.0 star property
8.4 out of 10, Very good, (1823)
"Everything was perfect except the Clorox scent in the room. "
The price is £224
per night
12 May - 13 May
Paradise Point Resort & Spa
Lobby
Wyndham Garden San Diego Near SeaWorld
3.0 star property
7.2 out of 10, Good, (2616)
"Excellent location, beach chairs and towels, overnight parking charge is a negative, the workout gym excellent "
The price is £102
per night
16 May - 17 May
Wyndham Garden San Diego Near SeaWorld
Aerial view
The Dana on Mission Bay
3.5 star property
8.6 out of 10, Excellent, (2424)
"Very clean property and room and beautiful location."
The price is £161
per night
13 May - 14 May
The Dana on Mission Bay
Save an average of 15% on thousands of hotels when you're signed in
Pool
California Suites Hotel
2.0 star property
7.0 out of 10, Good, (1314)
"For the location and price point, it’s a decent stay."
The price is £88
per night
13 May - 14 May
California Suites Hotel
Outdoor pool
Mission Bay Inn San Diego
2.5 star property
7.4 out of 10, Good, (1012)
"Good"
The price is £80
per night
27 May - 28 May
Mission Bay Inn San Diego
Lobby
Catamaran Resort and Spa
4.0 star property
7.8 out of 10, Good, (1114)
"I love this place. Great location and staff is very helpful. "
The price is £223
per night
12 May - 13 May
Catamaran Resort and Spa
Premium 2 Queen beds with sofa sleeper ,ocean view- Non pet-friendly | Iron/ironing board, travel cot, free WiFi, bed sheets
Ocean Villa Inn
2.5 star property
8.2 out of 10, Very good, (1003)
"Great if you are traveling with pups "
The price is £87
per night
12 May - 13 May
Ocean Villa Inn
Balcony view
La Jolla Shores Hotel
3.0 star property
8.8 out of 10, Excellent, (1271)
"Everything was great...except that the room smelled like mold. And they did not have a microwave in the room."
The price is £344
per night
24 May - 25 May
La Jolla Shores Hotel
Outdoor pool, pool umbrellas, pool loungers
Handlery Hotel
3.5 star property
7.8 out of 10, Good, (1568)
"I was in a quiet area."
The price is £98
per night
12 May - 13 May
Handlery Hotel
Outdoor pool, open 7:00 AM to 10:00 PM, pool loungers
Old Town Inn
2.5 star property
9.2 out of 10, Wonderful, (1340)
"Very nice motel within walking distance of Old Town. Pool. Continental breakfast. A bed so comfortable you want to stay in it all day. One quibble - the bath towels. Can you actually buy towels that thin? Or do you buy regular towels and wash them to death? Whatever. If you want to stay near Old Town, you can’t beat the Old Town Inn for the price."
The price is £157
per night
12 May - 13 May
Old Town Inn
Outdoor pool
Hampton Inn San Diego/Mission Valley
2.5 star property
8.6 out of 10, Excellent, (1000)
"Nothing"
The price is £122
per night
27 May - 28 May
Hampton Inn San Diego/Mission Valley
Meeting facility
Four Points by Sheraton San Diego
3.5 star property
7.8 out of 10, Good, (1000)
"Great stay! "
The price is £112
per night
30 May - 31 May
Four Points by Sheraton San Diego
Outdoor pool, open 9:00 AM to 10:00 PM, pool loungers
Residence Inn by Marriott San Diego Sorrento Mesa/Sorrento Valley
3.0 star property
8.8 out of 10, Excellent, (555)
"I was very happy with my stay. Kathy at the front desk when I checked in was very friendly and helpful. "
The price is £143
per night
19 May - 20 May
Residence Inn by Marriott San Diego Sorrento Mesa/Sorrento Valley
BBQ/picnic Area
Holiday Inn Express & Suites La Jolla – Windansea Beach, an IHG Hotel
2.5 star property
8.8 out of 10, Excellent, (1002)
"Shower room needs to have a complete door to shut. It only had a half sized door and it wasn’t comfortable for me take a shower because of water being splashing over to the bathroom floor. I was very surprised to see the shower room like that! "
The price is £158
per night
15 May - 16 May
Holiday Inn Express & Suites La Jolla – Windansea Beach, an IHG Hotel
Exterior
E-Z 8 Motel Old Town
2.5 star property
5.8 out of 10, (2029)
"My room was very clean, and there staff are very nice and helpful hight security made everything safe at night for guests, if like me a reasonable rate choices together with a very clean environment..."
The price is £78
per night
12 May - 13 May
E-Z 8 Motel Old Town
Lobby
Riverleaf Inn Mission Valley
2.5 star property
5.8 out of 10, (1212)
"The front clerk is very polite and helpful"
The price is £83
per night
14 May - 15 May
Riverleaf Inn Mission Valley
Front of property – evening/night
Pantai Inn
3.5 star property
9.4 out of 10, Exceptional, (881)
"This was a lovely property. Beautiful location. We enjoyed our stay and will definitely be back."
The price is £254
per night
15 May - 16 May
Pantai Inn
Aerial view
Grande Colonial Hotel
4.0 star property
9.4 out of 10, Exceptional, (1001)
"Location in the heart of the cove is the perfect place to experience La Jolla. Our room in the main building was more than ample and we especially appreciated that valet parking was included. Restaurant is pricey but well worth the price, Just a lovely time in a historic spot."
The price is £264
per night
12 May - 13 May
Grande Colonial Hotel
Lobby
Travelodge by Wyndham San Diego SeaWorld
2.0 star property
5.6 out of 10, (1001)
"Even though I called the hotel to give them a heads up for a very late check in , they were not prepared for our arrival. No red carpet , no elevator , rooms on the third floor, out dated bathrooms and soft mattresses ( overused…)! Great location for just about anywhere you want to go ! Food , places to see… Inexpensive fast food just walking distance. We rented a car , so I was concerned about safe but it turned out to be false alarm ! Took us only 10 , 15 minutes to go anywhere. I would...
The price is £65
per night
16 May - 17 May
Travelodge by Wyndham San Diego SeaWorld
Outdoor pool
Hampton Inn San Diego-Kearny Mesa
2.5 star property
9.0 out of 10, Wonderful, (1002)
"Smells so good. "
The price is £137
per night
28 May - 29 May
Hampton Inn San Diego-Kearny Mesa
Don't see what you're looking for?
See all available properties in Mission Bay
Lowest nightly price found within the past 24 hours based on a 1 night stay for 2 adults. Prices and availability subject to change. Additional terms may apply.

Destinations near San Diego

Frequently asked questions

What's the area like around Mission Bay?

Mission Bay is located in a family-friendly area of San Diego known for its array of dining options and popular zoo. If you're looking for a convenient place to stay, take a look at the 62 hotels and other accommodation options you'll find within a mile.

How many hotels will I find near Mission Bay?

Expedia has 62 hotels and other accommodation options within a mile from Mission Bay.

If I need to cancel the hotel reservation for my stay near Mission Bay, will I receive a refund?

Yes! You'll find that most room reservations are fully refundable if cancelled prior to the hotel's cancellation deadline, which is usually within 24-48 hours of the scheduled arrival. If you booked a non-refundable reservation, you might still have the option to cancel and get a refund within 24 hours of booking. Enter your dates, click on "Search", then you can filter by "fully refundable" to view the best deals near Mission Bay.

What can I see and do near Mission Bay?

Study the collections at Maritime Museum of San Diego, Whaley House Museum or Junipero Serra Museum. Casa de Machado y Stewart, McCoy Museum House and Casa de Estudillo are well-known local landmarks worth a visit. You can catch a show at Humphreys Concerts by the Bay, Cygnet Theater Company and Red Spade Theater.

Mission Bay Hotel Reviews
Expedia verified reviews