£109 Cheap Flights from Tokyo (NRT) to Kota Kinabalu (BKI)

View £109 flight on Wed, 13 May 2026Opens in a new window

Flight 1

Popular airlines from Narita Intl. Airport (NRT) to Kota Kinabalu Intl. Airport (BKI)

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Cheap Flights from Tokyo (NRT) to Kota Kinabalu (BKI)

Prices were available within the past 7 days and start at £109 for one-way flights and £244 for round trip, for the period specified. Prices and availability are subject to change. Additional terms apply.

Scoot
Sat, 9 May - Mon, 11 May
NRT
Tokyo
BKI
Kota Kinabalu
£244 Return, found 3 days ago
£244
Return
found 3 days ago
Select Scoot flight, departing Sat, 9 May from Tokyo to Kota Kinabalu, returning Mon, 11 May, priced at £244 found 3 days ago
Scoot
Mon, 13 Jul - Mon, 20 Jul
NRT
Tokyo
BKI
Kota Kinabalu
£254 Return, found 4 days ago
£254
Return
found 4 days ago
Select Scoot flight, departing Mon, 13 Jul from Tokyo to Kota Kinabalu, returning Mon, 20 Jul, priced at £254 found 4 days ago
Scoot
Sat, 9 May - Mon, 11 May
NRT
Tokyo
BKI
Kota Kinabalu
£266 Return, found 3 days ago
£266
Return
found 3 days ago
Select Scoot flight, departing Sat, 9 May from Tokyo to Kota Kinabalu, returning Mon, 11 May, priced at £266 found 3 days ago
Scoot
Sat, 9 May - Mon, 11 May
NRT
Tokyo
BKI
Kota Kinabalu
£273 Return, found 3 days ago
£273
Return
found 3 days ago
Select Scoot flight, departing Sat, 9 May from Tokyo to Kota Kinabalu, returning Mon, 11 May, priced at £273 found 3 days ago
Scoot
Mon, 13 Jul - Mon, 20 Jul
NRT
Tokyo
BKI
Kota Kinabalu
£283 Return, found 4 days ago
£283
Return
found 4 days ago
Select Scoot flight, departing Mon, 13 Jul from Tokyo to Kota Kinabalu, returning Mon, 20 Jul, priced at £283 found 4 days ago
Scoot
Sat, 9 May - Mon, 11 May
NRT
Tokyo
BKI
Kota Kinabalu
£295 Return, found 3 days ago
£295
Return
found 3 days ago
Select Scoot flight, departing Sat, 9 May from Tokyo to Kota Kinabalu, returning Mon, 11 May, priced at £295 found 3 days ago
Singapore Airlines
Mon, 13 Jul - Mon, 20 Jul
NRT
Tokyo
BKI
Kota Kinabalu
£556 Return, found 4 days ago
£556
Return
found 4 days ago
Select Singapore Airlines flight, departing Mon, 13 Jul from Tokyo to Kota Kinabalu, returning Mon, 20 Jul, priced at £556 found 4 days ago
China Southern Airlines
Sun, 9 Aug - Tue, 15 Sept
NRT
Tokyo
BKI
Kota Kinabalu
£651 Return, found 6 days ago
£651
Return
found 6 days ago
Select China Southern Airlines flight, departing Sun, 9 Aug from Tokyo to Kota Kinabalu, returning Tue, 15 Sept, priced at £651 found 6 days ago
Korean Air
Fri, 3 Jul - Sat, 11 Jul
NRT
Tokyo
BKI
Kota Kinabalu
£666 Return, found 5 days ago
£666
Return
found 5 days ago
Select Korean Air flight, departing Fri, 3 Jul from Tokyo to Kota Kinabalu, returning Sat, 11 Jul, priced at £666 found 5 days ago
Malaysia Airlines
Mon, 13 Jul - Mon, 20 Jul
NRT
Tokyo
BKI
Kota Kinabalu
£920 Return, found 4 days ago
£920
Return
found 4 days ago
Select Malaysia Airlines flight, departing Mon, 13 Jul from Tokyo to Kota Kinabalu, returning Mon, 20 Jul, priced at £920 found 4 days ago

Frequently asked questions

How much does a flight from Tokyo (NRT-Narita Intl.) to Kota Kinabalu (BKI-Kota Kinabalu Intl.) cost?
One-way flights typically cost between $2,116 and $17,303 and return flights often range between $2,116 and $17,303. Flight prices vary based on the month and day of the week you want to travel, as well as the airline and how far in advance you book your ticket. Filter your search on Expedia by "Price (lowest to highest)" to see the cheapest fares first, and use the Price Tracking tool to receive alerts when Anaa (AAA) to Toronto, ON (YYZ-Pearson Intl.) ticket fares go up or down.*Typical price ranges based on flights available on Expedia in the last year. Prices include multi-airline options.
How do I find cheap flights from Tokyo (NRT-Narita Intl.) to Kota Kinabalu (BKI-Kota Kinabalu Intl.)?
To find a cheap flight from Tokyo (NRT-Narita Intl.) to Kota Kinabalu (BKI-Kota Kinabalu Intl.), be flexible with your dates. Traveling outside of peak vacation months and booking a mid-week flight can help you save. Early morning and late night flights are often more affordable, too. Expedia allows you to compare flight times, airlines and routes all in one place to find low fares. You can also set up Price Tracking and receive alerts when fares go up or down.
What is the best time to fly from Tokyo (NRT-Narita Intl.) to Kota Kinabalu (BKI-Kota Kinabalu Intl.)?
The best time to fly is usually mid-week (Tuesday or Wednesday) and during early morning hours as flights tend to be cheaper, less crowded, and generally more on-time. Avoid major holidays and peak vacation seasons for smoother travel. Combining off-peak days and hours often gives the best combination of cost, comfort, and convenience.
How many flights per day from Tokyo (NRT-Narita Intl.) to Kota Kinabalu (BKI-Kota Kinabalu Intl.)?
There are approximately 42 connecting flights per day from Tokyo (NRT-Narita Intl.) (NRT) to Kota Kinabalu (BKI-Kota Kinabalu Intl.) (BKI). Some common connection points include Kuala Lumpur Intl. (KUL), Taoyuan Intl. (TPE), and Hong Kong Intl. (HKG).
What is the earliest flight from Tokyo (NRT-Narita Intl.) to Kota Kinabalu (BKI-Kota Kinabalu Intl.)?
The earliest flight from Tokyo (NRT-Narita Intl.) (NRT) to Kota Kinabalu (BKI-Kota Kinabalu Intl.) (BKI) typically departs at approximately 6:25 AM local time. This service is operated by Jetstar Japan and Shanghai Airlines, and it's a seasonal service active in March. An early departure like this can help maximize your time at your destination. To compare early flights on Expedia, select the "Early Morning" and "Morning" filters in your search.
What day of the week has the most flights from Tokyo (NRT-Narita Intl.) to Kota Kinabalu (BKI-Kota Kinabalu Intl.)?
You'll find the most flights from Tokyo (NRT-Narita Intl.) to Kota Kinabalu (BKI-Kota Kinabalu Intl.) on a Thursday, with around 44 flights available. This gives you plenty of options for your travel plans. Major airlines on this route include MU, CX, and MH. Thursday offers notably more flight options compared to other days of the week.
What are the most popular departure times for flights from Tokyo (NRT-Narita Intl.) to Kota Kinabalu (BKI-Kota Kinabalu Intl.)?
The most popular departure times for flights from Tokyo (NRT-Narita Intl.) to Kota Kinabalu (BKI-Kota Kinabalu Intl.) are between 9am and 12pm. About 33% of passengers prefer this time window. Many major carriers, including Royal Brunei Airlines, Malaysia Airlines and Japan Airlines, offer flights during this window. This timing works well because it allows for a morning departure, getting you to your destination with plenty of time to settle in.
How long does it take to fly from Tokyo (NRT-Narita Intl.) to Kota Kinabalu (BKI-Kota Kinabalu Intl.)?
A flight from NRT to BKI with a layover takes around 12 hours 30 minutes, with the route covering approximately 2,576 miles. Keep in mind that actual flight times can vary due to wind patterns, weather, and air traffic.
Can you fly business or first class from Tokyo (NRT-Narita Intl.) to Kota Kinabalu (BKI-Kota Kinabalu Intl.)?
Select the "Business class" and "First class" filters when looking for NRT to BKI flights on Expedia. This is the easiest way to compare prices, routes and flight times for your trip.
How do I earn miles on a Tokyo (NRT-Narita Intl.) to Kota Kinabalu (BKI-Kota Kinabalu Intl.) flight with Expedia?
It's easy to earn miles on a Tokyo (NRT-Narita Intl.) to Kota Kinabalu (BKI-Kota Kinabalu Intl.) flight when you book with Expedia. Before you confirm your booking, simply select your frequent flyer program and enter your program number. As a member of One Key™, you can also earn OneKeyCash™* on top of your airline miles when you book with Expedia.*Excludes taxes and fees. OneKeyCash is not redeemable for cash and can only be used on Expedia and other participating brands.
What airports do you fly into for Kota Kinabalu from Narita Intl. (NRT)?
From Narita Intl. (NRT), you can fly into Kota Kinabalu Intl. (BKI) to reach Kota Kinabalu. Some flights may connect through major hubs like Hong Kong Intl. (HKG), Suvarnabhumi Intl. (BKK), Taoyuan Intl. (TPE) before reaching Kota Kinabalu. Compare routes and airports on Expedia to find the best flight options for your travel plans.
Is it cheaper to buy a plane ticket from Tokyo (NRT-Narita Intl.) to Kota Kinabalu (BKI-Kota Kinabalu Intl.) at the last minute?
Typically, booking a last minute flight from Tokyo (NRT-Narita Intl.) to Kota Kinabalu (BKI-Kota Kinabalu Intl.) will be more expensive than booking in advance. As the departure date approaches, there are usually fewer seats available which can drive up the cost. However, if there's some wiggle room with your travel dates and times, you could bag a cheap last-minute fare.
Is it cheaper to book a Tokyo (NRT-Narita Intl.) to Kota Kinabalu (BKI-Kota Kinabalu Intl.) flight and hotel package?
Securing a Tokyo (NRT-Narita Intl.) to Kota Kinabalu (BKI-Kota Kinabalu Intl.) flight and hotel package is usually cheaper than booking separately. With Expedia, you can enjoy the ease of organizing your travels all in one place. Select from our extensive range of stays and then add flights, activities and car rentals to your booking. Bundle everything together, and you could save hundreds of dollars.
Can I cancel or change the date of my flight from Tokyo (NRT-Narita Intl.) to Kota Kinabalu (BKI-Kota Kinabalu Intl.)?
If you booked your Tokyo (NRT-Narita Intl.) to Kota Kinabalu (BKI-Kota Kinabalu Intl.) flight within the last 24 hours, you may be able to modify or cancel it without any fees. Depending on the airline and the type of ticket you have, additional charges may apply for changes beyond this timeframe. Airline policies and contact information can be found in your itinerary or confirmation email. Or, head to our Customer Service portal if you'd like more information.

Travel information

Origin airport
Narita Intl.
Destination airport
Kota Kinabalu Intl.
Return price
£244
Distance
4121 km

Book with confidence

Compare flights from Tokyo to Kota Kinabalu easily and book with confidence

For travelling on business or for pleasure, Expedia makes it easy to book your flights from Tokyo to Kota Kinabalu. Operating between them flights per day, 20 airlines cover the route. And fly direct, getting you to Kota Kinabalu Intl. in just hours. If you have a preferred carrier, use our advanced search tool to find the right flight from Narita Intl. to Kota Kinabalu Intl..  

To make things even better, in the advanced search, you can also choose to fly economy, premium economy, business or first class, select your maximum number of stops, and pick your preferred departure and arrival time. You can also opt for refundable and direct flights. 

Grab a great deal on your flight from Narita Intl. (NRT) to Kota Kinabalu Intl. (BKI)

The easiest way to view the best deals on flights from Tokyo to Kota Kinabalu today is to enter your travel dates and hit search. From here, you can sort your results by price to see the cheapest flights first. Right now, return flights from Narita Intl. to Kota Kinabalu Intl. start at just £244 and range up to £920.  

To find an even better deal, try  

  • being flexible on your dates – midweek flights can be cheaper
  • looking for other airports near Tokyo and Kota Kinabalu
  • booking your flight during May, the cheapest month on this route
  • varying your flight times – early morning and late at night are sometimes cheaper 

Why you should book your Tokyo to Kota Kinabalu flight with Expedia!

We cater for all flight types, cabin classes and airlines. So whether you’re booking flights from Narita Intl. to Kota Kinabalu Intl. for a budget break or a business trip with a bit of pleasure thrown in, we make it easy to secure the seat that’s right for you.  

Thanks to our supersized inventory that offers great choice all in one place, you know you’ll get a great deal with Expedia. Especially if you bundle your flight together with your hotel, you will unlock amazing savings. For added peace of mind, you can choose flexible bookings or filter to find refundable options, so you won’t pay a fee to change your flight.  

Compare flights from Tokyo to Kota Kinabalu easily and book with confidence

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*Available to Expedia members.