Title: £65 Cheap Flights from Manila to Kota Kinabalu (MNL to BKI) - Expedia.co.uk ![Kota Kinabalu featuring boating and landscape views](https://images.trvl-media.com/place/602/95c3d6f7-0630-478a-9720-2853a972563c.jpg?impolicy=fcrop&w=1200&h=500&q=medium) ![](https://images.trvl-media.com/place/602/95c3d6f7-0630-478a-9720-2853a972563c.jpg?impolicy=fcrop&w=1200&h=500&q=medium) # £65 Cheap Flights from Manila (MNL) to Kota Kinabalu (BKI) [View £65 flight on Sat, 24 Oct 2026](https://expedia.co.uk/Flights-Search?trip=oneway&leg1=from:MNL,to:BKI,departure:24/10/2026TANYT&passengers=children:0,adults:1,seniors:0,infantinlap:N&mode=search&options=sortby:price&paandi=true&flp=mdl:flights-flex-module,price:64.44&airProductToken=AQpkCjAI1KQBEgM1ODkYrFsgkmoon56bAzD2n5sDOFhAAFgBagVCQVNJQ3IIWDFDT0RQSEEKMAjUpAESAzQxNhiSaiDBQiiLo5sDMKGkmwM4WEAAWAFqBUJBU0lDcghYMUNPRFBIQRIKCAsQARgIKgJUUhgBIgQIARABKAIwAw) ## Popular airlines from Ninoy Aquino Intl. Airport (MNL) to Kota Kinabalu Intl. Airport (BKI) - ![](https://forever.travel-assets.com/flex/flexmanager/images/2024/09/23/landing_airline_sq_logo_TR.svg) Scoot [](https://www.expedia.co.uk/Flights-Search?leg1=from:MNL,to:BKI,departure:30/03/2026TANYT&leg2=from:BKI,to:MNL,departure:06/04/2026TANYT&trip=roundtrip&passengers=adults:1,children:0,infantinlap:N&mode=search&pageId=0&filters=[{"preferredAirlineFilterValue":{"carrierCode":"TR"}}]) - ![](https://forever.travel-assets.com/flex/flexmanager/images/2024/09/23/landing_airline_sq_logo_SQ.svg) Singapore Airlines [](https://www.expedia.co.uk/Flights-Search?leg1=from:MNL,to:BKI,departure:30/03/2026TANYT&leg2=from:BKI,to:MNL,departure:06/04/2026TANYT&trip=roundtrip&passengers=adults:1,children:0,infantinlap:N&mode=search&pageId=0&filters=[{"preferredAirlineFilterValue":{"carrierCode":"SQ"}}]) - ![](https://forever.travel-assets.com/flex/flexmanager/images/2024/09/23/landing_airline_sq_logo_MH.svg) Malaysia Airlines [](https://www.expedia.co.uk/Flights-Search?leg1=from:MNL,to:BKI,departure:30/03/2026TANYT&leg2=from:BKI,to:MNL,departure:06/04/2026TANYT&trip=roundtrip&passengers=adults:1,children:0,infantinlap:N&mode=search&pageId=0&filters=[{"preferredAirlineFilterValue":{"carrierCode":"MH"}}]) - ![](https://forever.travel-assets.com/flex/flexmanager/images/2024/09/23/landing_airline_sq_logo_CX.svg) Cathay Pacific [](https://www.expedia.co.uk/Flights-Search?leg1=from:MNL,to:BKI,departure:30/03/2026TANYT&leg2=from:BKI,to:MNL,departure:06/04/2026TANYT&trip=roundtrip&passengers=adults:1,children:0,infantinlap:N&mode=search&pageId=0&filters=[{"preferredAirlineFilterValue":{"carrierCode":"CX"}}]) - ![](https://forever.travel-assets.com/flex/flexmanager/images/2024/09/23/landing_airline_sq_logo_PR.svg) Philippine Airlines [](https://www.expedia.co.uk/Flights-Search?leg1=from:MNL,to:BKI,departure:30/03/2026TANYT&leg2=from:BKI,to:MNL,departure:06/04/2026TANYT&trip=roundtrip&passengers=adults:1,children:0,infantinlap:N&mode=search&pageId=0&filters=[{"preferredAirlineFilterValue":{"carrierCode":"PR"}}]) - ![](https://forever.travel-assets.com/flex/flexmanager/images/2024/09/23/landing_airline_sq_logo_CZ.svg) China Southern Airlines [](https://www.expedia.co.uk/Flights-Search?leg1=from:MNL,to:BKI,departure:30/03/2026TANYT&leg2=from:BKI,to:MNL,departure:06/04/2026TANYT&trip=roundtrip&passengers=adults:1,children:0,infantinlap:N&mode=search&pageId=0&filters=[{"preferredAirlineFilterValue":{"carrierCode":"CZ"}}]) - ![](https://a.travel-assets.com/air/airlines/z2_sq.svg) AirAsia Philippines [](https://www.expedia.co.uk/Flights-Search?leg1=from:MNL,to:BKI,departure:30/03/2026TANYT&leg2=from:BKI,to:MNL,departure:06/04/2026TANYT&trip=roundtrip&passengers=adults:1,children:0,infantinlap:N&mode=search&pageId=0&filters=[{"preferredAirlineFilterValue":{"carrierCode":"Z2"}}]) - ![](https://a.travel-assets.com/travel-assets-manager/pictogram-bex/light__notification.svg) ### Be in the know Get alerts if flight prices drop or rise\* - ![](https://a.travel-assets.com/travel-assets-manager/pictogram-bex/light__deals.svg) ### Book smarter Save up to 25% on select hotels after you book a flight\* - ![](https://a.travel-assets.com/travel-assets-manager/pictogram-bex/light__trophy.svg) ### Earn twice Earn your airline miles on top of our rewards [Sign in](https://www.expedia.co.uk/login) ## Cheap Flights from Manila (MNL) to Kota Kinabalu (BKI) Prices were available within the past 7 days and start at £65 for one-way flights and £133 for round trip, for the period specified. Prices and availability are subject to change. Additional terms apply. All deals One way Return ![Scoot](//images.trvl-media.com/media/content/expus/graphics/static_content/fusion/v0.1b/images/airlines/TR.gif) Wed, 2 Sept - Mon, 7 Sept MNL Manila BKI Kota Kinabalu £133 Return found 2 days ago [](https://expedia.co.uk/Flights-Search?trip=roundtrip&leg1=from:MNL,to:BKI,departure:02/09/2026TANYT&leg2=from:BKI,to:MNL,departure:07/09/2026TANYT&passengers=children:0,adults:1,seniors:0,infantinlap:N&mode=search&options=sortby:price&paandi=true&flp=mdl:flights-flex-module,price:132.20&airProductToken=AQpkCjAI1KQBEgM1ODkYrFsgkmoon9WWAzD21pYDOE5AAFgBagVCQVNJQ3IITjFDT0RQSEEKMAjUpAESAzQxNhiSaiDBQij82ZYDMJLblgM4TkAAWAFqBUJBU0lDcghOMUNPRFBIQQpkCjAI1KQBEgM0MTcYwUIgkmoo7pOXAzD_lJcDOFhAAFgBagVCQVNJQ3IIWDFDT0RQSEEKMAjUpAESAzU4OBiSaiCsWyiulpcDMJ6YlwM4WEAAWAFqBUJBU0lDcghYMUNPRFBIQRIKCAsQARgIKgJUUhgBIgQIARABKAIwAw) ![Scoot](//images.trvl-media.com/media/content/expus/graphics/static_content/fusion/v0.1b/images/airlines/TR.gif) Wed, 2 Sept - Sat, 5 Sept MNL Manila BKI Kota Kinabalu £133 Return found 1 day ago [](https://expedia.co.uk/Flights-Search?trip=roundtrip&leg1=from:MNL,to:BKI,departure:02/09/2026TANYT&leg2=from:BKI,to:MNL,departure:05/09/2026TANYT&passengers=children:0,adults:1,seniors:0,infantinlap:N&mode=search&options=sortby:price&paandi=true&flp=mdl:flights-flex-module,price:132.58&airProductToken=AQpkCjAI1KQBEgM1ODkYrFsgkmoon9WWAzD21pYDOE5AAFgBagVCQVNJQ3IITjFDT0RQSEEKMAjUpAESAzQxNhiSaiDBQij82ZYDMJLblgM4TkAAWAFqBUJBU0lDcghOMUNPRFBIQQpkCjAI1KQBEgM0MTcYwUIgkmoovf2WAzDO_pYDOFhAAFgBagVCQVNJQ3IIWDFDT0RQSEEKMAjUpAESAzU4OBiSaiCsWyju_5YDMN6BlwM4WEAAWAFqBUJBU0lDcghYMUNPRFBIQRIKCAsQARgIKgJUUhgBIgQIARABKAIwAw) ![Scoot](//images.trvl-media.com/media/content/expus/graphics/static_content/fusion/v0.1b/images/airlines/TR.gif) Wed, 2 Sept - Sat, 5 Sept MNL Manila BKI Kota Kinabalu £139 Return found 1 day ago [](https://expedia.co.uk/Flights-Search?trip=roundtrip&leg1=from:MNL,to:BKI,departure:02/09/2026TANYT&leg2=from:BKI,to:MNL,departure:05/09/2026TANYT&passengers=children:0,adults:1,seniors:0,infantinlap:N&mode=search&options=sortby:price&paandi=true&flp=mdl:flights-flex-module,price:138.43&airProductToken=AQpkCjAI1KQBEgM1ODkYrFsgkmoon9WWAzD21pYDOE5AAFgBagVCQVNJQ3IITjFDT0RQSEEKMAjUpAESAzQxNhiSaiDBQij82ZYDMJLblgM4TkAAWAFqBUJBU0lDcghOMUNPRFBIQQpkCjAI1KQBEgM0MTcYwUIgkmoovf2WAzDO_pYDOE5AAFgBagVCQVNJQ3IITjFDT0RQSEEKMAjUpAESAzU5MBiSaiCsWyjwhZcDMOCHlwM4TkAAWAFqBUJBU0lDcghOMUNPRFBIQRIKCAsQARgIKgJUUhgBIgQIARABKAIwAw) ![Scoot](//images.trvl-media.com/media/content/expus/graphics/static_content/fusion/v0.1b/images/airlines/TR.gif) Tue, 1 Sept - Fri, 4 Sept MNL Manila BKI Kota Kinabalu £144 Return found 1 day ago [](https://expedia.co.uk/Flights-Search?trip=roundtrip&leg1=from:MNL,to:BKI,departure:01/09/2026TANYT&leg2=from:BKI,to:MNL,departure:04/09/2026TANYT&passengers=children:0,adults:1,seniors:0,infantinlap:N&mode=search&options=sortby:price&paandi=true&flp=mdl:flights-flex-module,price:143.63&airProductToken=AQpkCjAI1KQBEgM1OTEYrFsgkmoo_M-WAzDd0ZYDOFdAAFgBagVCQVNJQ3IIVzFDT0RQSEEKMAjUpAESAzQ0NhiSaiDBQij81JYDMJLWlgM4V0AAWAFqBUJBU0lDcghXMUNPRFBIQQpkCjAI1KQBEgM0MTcYwUIgkmoonfKWAzCu85YDOFhAAFgBagVCQVNJQ3IIWDFDT0RQSEEKMAjUpAESAzU4OBiSaiCsWyjO9JYDML72lgM4WEAAWAFqBUJBU0lDcghYMUNPRFBIQRIKCAsQARgIKgJUUhgBIgQIARABKAIwAw) ![Scoot](//images.trvl-media.com/media/content/expus/graphics/static_content/fusion/v0.1b/images/airlines/TR.gif) Wed, 2 Sept - Mon, 7 Sept MNL Manila BKI Kota Kinabalu £158 Return found 2 days ago [](https://expedia.co.uk/Flights-Search?trip=roundtrip&leg1=from:MNL,to:BKI,departure:02/09/2026TANYT&leg2=from:BKI,to:MNL,departure:07/09/2026TANYT&passengers=children:0,adults:1,seniors:0,infantinlap:N&mode=search&options=sortby:price&paandi=true&flp=mdl:flights-flex-module,price:157.37&airProductToken=AQpkCjAI1KQBEgM1ODkYrFsgkmoon9WWAzD21pYDOEhAAFgBagVCQVNJQ3IISDFDT0RQSEEKMAjUpAESAzQ5MBiSaiDBQiit4ZYDMMPilgM4SEAAWAFqBUJBU0lDcghIMUNPRFBIQQpkCjAI1KQBEgM0NDcYwUIgkmoo7o6XAzD_j5cDOFhAAFgBagVCQVNJQ3IIWDFDT0RQSEEKMAjUpAESAzU4OBiSaiCsWyiulpcDMJ6YlwM4WEAAWAFqBUJBU0lDcghYMUNPRFBIQRIKCAsQARgIKgJUUhgBIgQIARABKAIwAw) ![Scoot](//images.trvl-media.com/media/content/expus/graphics/static_content/fusion/v0.1b/images/airlines/TR.gif) Sun, 13 Sept - Mon, 21 Sept MNL Manila BKI Kota Kinabalu £158 Return found 1 day ago [](https://expedia.co.uk/Flights-Search?trip=roundtrip&leg1=from:MNL,to:BKI,departure:13/09/2026TANYT&leg2=from:BKI,to:MNL,departure:21/09/2026TANYT&passengers=children:0,adults:1,seniors:0,infantinlap:N&mode=search&options=sortby:price&paandi=true&flp=mdl:flights-flex-module,price:157.80&airProductToken=AQpkCjAI1KQBEgM1ODkYrFsgkmoo_9CXAzDg0pcDOEhAAFgBagVCQVNJQ3IISDFDT0RQSEEKMAjUpAESAzQ0NhiSaiDBQij825cDMJLdlwM4SEAAWAFqBUJBU0lDcghIMUNPRFBIQQpkCjAI1KQBEgM0NDcYwUIgkmoorqyYAzC_rZgDOFhAAFgBagVCQVNJQ3IIWDFDT0RQSEEKMAjUpAESAzU4OBiSaiCsWyjus5gDMN61mAM4WEAAWAFqBUJBU0lDcghYMUNPRFBIQRIKCAsQARgIKgJUUhgBIgQIARABKAIwAw) ![Singapore Airlines](//images.trvl-media.com/media/content/expus/graphics/static_content/fusion/v0.1b/images/airlines/SQ.gif) Tue, 1 Sept - Fri, 4 Sept MNL Manila BKI Kota Kinabalu £195 Return found 1 day ago [](https://expedia.co.uk/Flights-Search?trip=roundtrip&leg1=from:MNL,to:BKI,departure:01/09/2026TANYT&leg2=from:BKI,to:MNL,departure:04/09/2026TANYT&passengers=children:0,adults:1,seniors:0,infantinlap:N&mode=search&options=sortby:price&paandi=true&flp=mdl:flights-flex-module,price:194.80&airProductToken=AQpxCjAI06IBEgM5MTkYrFsgkmoo186WAzCu0JYDOEtAAFgBagVGRjUxU3IISzI1UEhSUE8KPQjTogESBDg0MjQYkmogwUIo_NmWAzCS25YDOEtAAVgBagVGRjUxU3IISzI1UEhSUE96CgjUpAESBDg0MjQKcQo9CNOiARIEODQyNRjBQiCSaiid8pYDMK7zlgM4S0AAWAFqBUZGNTFTcghLMjVQSFJQT3oKCNSkARIEODQyNQowCNOiARIDOTE4GJJqIKxbKPf8lgMw2P6WAzhLQAFYAWoFRkY1MVNyCEsyNVBIUlBPEgoIAhABGAEqAlNRGAEiBAgBEAEoAigDKAQwDw) ![Royal Brunei Airlines](//images.trvl-media.com/media/content/expus/graphics/static_content/fusion/v0.1b/images/airlines/BI.gif) Mon, 6 Apr - Thu, 9 Apr MNL Manila BKI Kota Kinabalu £222 Return found 19 hours ago [](https://expedia.co.uk/Flights-Search?trip=roundtrip&leg1=from:MNL,to:BKI,departure:06/04/2026TANYT&leg2=from:BKI,to:MNL,departure:09/04/2026TANYT&passengers=children:0,adults:1,seniors:0,infantinlap:N&mode=search&options=sortby:price&paandi=true&flp=mdl:flights-flex-module,price:221.20&airProductToken=AQpUCigIwpIBEgM2ODYYrFsgwW0o-c-JAzD_0IkDOFNAAFgBcgdTRTFNUEhNCigIwpIBEgM4MjcYwW0gwUIol9qJAzC_2okDOFNAAVgBcgdTRTFNUEhNClQKKAjCkgESAzgyNhjBQiDBbSij74kDMMvviQM4U0AAWAFyB1NFMU1QSE0KKAjCkgESAzY4NRjBbSCsWyiW8IkDMKfxiQM4U0ABWAFyB1NFMU1QSE0SCggBEAEYASoCQkkYASIECAEQASgCKAQoBjAB) ![China Southern Airlines](//images.trvl-media.com/media/content/expus/graphics/static_content/fusion/v0.1b/images/airlines/CZ.gif) Sun, 3 May - Sat, 16 May MNL Manila BKI Kota Kinabalu £230 Return found 6 days ago [](https://expedia.co.uk/Flights-Search?trip=roundtrip&leg1=from:MNL,to:BKI,departure:03/05/2026TANYT&leg2=from:BKI,to:MNL,departure:16/05/2026TANYT&passengers=children:0,adults:1,seniors:0,infantinlap:N&mode=search&options=sortby:price&paandi=true&flp=mdl:flights-flex-module,price:229.60&airProductToken=AQpECiAIw7QBEgQzMDkyGKxbIIJoKIv7iwMwpvyLAzhWQABYAQogCMO0ARIEODQ4MxiCaCDBQii2_4sDMP6AjAM4VEABWAEKRAogCMO0ARIEODMzNhjBQiCCaCjokI0DMLWSjQM4RUAAWAEKIAjDtAESBDUwNTEYgmggrFso8ZKNAzCRlI0DOEVAAVgBEgoIARABGAEqAkNaGAEiBAgBEAEoBDAB) ![Cathay Pacific](//images.trvl-media.com/media/content/expus/graphics/static_content/fusion/v0.1b/images/airlines/CX.gif) Wed, 2 Sept - Mon, 7 Sept MNL Manila BKI Kota Kinabalu £261 Return found 2 days ago [](https://expedia.co.uk/Flights-Search?trip=roundtrip&leg1=from:MNL,to:BKI,departure:02/09/2026TANYT&leg2=from:BKI,to:MNL,departure:07/09/2026TANYT&passengers=children:0,adults:1,seniors:0,infantinlap:N&mode=search&options=sortby:price&paandi=true&flp=mdl:flights-flex-module,price:261.00&airProductToken=AQp5CjQIw7ABEgM5MDYYrFsgxzIoiteWAzCb2JYDOFFAAFgBaglFQ09OTElHSFRyCFFSMjFQSEFBCkEIw7ABEgQ1NzkwGMcyIMFCKIXclgMwvt2WAzhRQAFYAWoJRUNPTkxJR0hUcghRUjIxUEhBQXoKCNWeARIENTc5MAp5CkEIw7ABEgQ1NzkxGMFCIMcyKOuKlwMwqYyXAzhRQABYAWoJRUNPTkxJR0hUcghRUjIxUEhBQXoKCNWeARIENTc5MQo0CMOwARIDOTAxGMcyIKxbKLyOlwMwyI-XAzhRQAFYAWoJRUNPTkxJR0hUcghRUjIxUEhBQRIKCAEQARgBKgJDWBgBIgQIARABKAIoBCgGMAE) ## Alternative airports near Kota Kinabalu Prices were available within the past 7 days. Prices and availability are subject to change. [](https://www.expedia.co.uk/Flights-Search?leg1=from:MNL,to:BKI,departure:30/03/2026TANYT&leg2=from:BKI,to:MNL,departure:06/04/2026TANYT&trip=roundtrip&passengers=adults:1,children:0,infantinlap:N&mode=search&pageId=0&sortOrder=INCREASING&sortType=PRICE) BKI Kota Kinabalu Intl. CheapestClosest 9 min [Flights from £310 ](https://www.expedia.co.uk/Flights-Search?leg1=from:MNL,to:BKI,departure:30/03/2026TANYT&leg2=from:BKI,to:MNL,departure:06/04/2026TANYT&trip=roundtrip&passengers=adults:1,children:0,infantinlap:N&mode=search&pageId=0&sortOrder=INCREASING&sortType=PRICE) ## Find the cheapest month to fly from Manila (MNL) to Kota Kinabalu (BKI) ### September is typically the cheapest month to fly From £53 - £223 per traveller. ## Frequently asked questions ### How much is a flight from Manila Intl. Airport to Kota Kinabalu Intl. Airport (BKI)? ### Do I need to pay a cancellation fee if I cancel my flight from MNL to Kota Kinabalu Intl. Airport (BKI)? ### How do I find cheap flights from Manila Intl. Airport to Kota Kinabalu International Airport that have flexible change policies? ### How far is the flight from Ninoy Aquino Intl. Airport (MNL) to Kota Kinabalu International Airport? ### Which airlines fly direct from Manila Intl. Airport to Kota Kinabalu Intl. Airport (BKI)? ### Are Manila Intl. Airport to Kota Kinabalu Intl. Airport (BKI) flight tickets cheaper when they're purchased at the last minute? ## Travel information | Origin airport | Ninoy Aquino Intl. | | ------------------- | --------------------------------------------------------------------------------------------------------------------------------- | | Destination airport | Kota Kinabalu Intl. | | Airlines serving | Cathay Pacific, China Southern Airlines, Malaysia Airlines, Philippine Airlines, Royal Brunei Airlines, Scoot, Singapore Airlines | | Return price | £132 | | Distance | 1090 km | | Average flight time | 2 hours 15 mins | ## Book with confidence # Compare flights from Manila to Kota Kinabalu easily and book with confidence For travelling on business or for pleasure, Expedia makes it easy to book your flights from Manila to Kota Kinabalu. Operating between them flights per day, 20 airlines cover the route. And fly direct, getting you to Kota Kinabalu Intl. in just hours. If you have a preferred carrier, use our advanced search tool to find the right flight from Ninoy Aquino Intl. to Kota Kinabalu Intl.. To make things even better, in the advanced search, you can also choose to fly economy, premium economy, business or first class, select your maximum number of stops, and pick your preferred departure and arrival time. You can also opt for refundable and direct flights. Grab a great deal on your flight from Ninoy Aquino Intl. (MNL) to Kota Kinabalu Intl. (BKI) The easiest way to view the best deals on flights from Manila to Kota Kinabalu today is to enter your travel dates and hit search. From here, you can sort your results by price to see the cheapest flights first. Right now, return flights from Ninoy Aquino Intl. to Kota Kinabalu Intl. start at just £133 and range up to £261\. To find an even better deal, try - being flexible on your dates – midweek flights can be cheaper - looking for other airports near Manila and Kota Kinabalu - booking your flight during September, the cheapest month on this route - varying your flight times – early morning and late at night are sometimes cheaper Why you should book your Manila to Kota Kinabalu flight with Expedia! We cater for all flight types, cabin classes and airlines. So whether you’re booking flights from Ninoy Aquino Intl. to Kota Kinabalu Intl. for a budget break or a business trip with a bit of pleasure thrown in, we make it easy to secure the seat that’s right for you. Thanks to our supersized inventory that offers great choice all in one place, you know you’ll get a great deal with Expedia. Especially if you bundle your flight together with your hotel, you will unlock amazing savings. 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