A lakeside lodge with a wooden pier, surrounded by lush greenery and a forested backdrop.

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Check availability on San Juan Island Cheap Hotels

Tonight
29 Sept - 30 Sept
Tomorrow
30 Sept - 1 Oct
This weekend
2 Oct - 4 Oct
Next weekend
9 Oct - 11 Oct

Our top choices for San Juan Island cheap hotels

A building with a covered outdoor area, red doors, and hanging flower baskets.
A hotel room with a grey armchair, a small round table, a bedside table, a lamp, and a potted plant.
A two-story building with a balcony, surrounded by a well-maintained garden with various plants and flowers.
A pool area with a wooden deck, surrounded by trees with pinkish leaves.

1. Discovery Inn

Discovery Inn
Friday Harbor
United States
Robert
£132
includes taxes & fees
12 Oct - 13 Oct
Discovery Inn
A motel with a row of rooms, a parking lot, and blooming flowers in the foreground.
A bathroom with a shower, a towel rack, and a shelf with a towel.
A wooden chair and a wooden dresser in a room with a wooden panel wall.
A room with two beds, wooden walls, and a window.

2. The Orca Inn

The Orca Inn
Friday Harbor
United States
Andrew
£75
includes taxes & fees
12 Oct - 13 Oct
The Orca Inn
A modern interior with sofas, a table, and hanging plants.
A modern lobby with a reception desk, seating area, and a large window with a view of the sea.
A modern interior with a stone fireplace, hanging lamps, and a sign indicating the property is for sale.
A covered outdoor swimming pool area with a hot tub, benches, and emergency exit signs.

3. Friday Harbor Suites

Friday Harbor Suites
Friday Harbor
United States
Jennifer
£134
includes taxes & fees
19 Oct - 20 Oct
Friday Harbor Suites
A serene outdoor seating area with a table and chairs, surrounded by lush greenery and a tree.
A two-story building with a red door, surrounded by a garden with various plants and flowers.
A grassy area with a pond, trees, and a red chair.
A dining table set with plates of food, glasses, and a vase of flowers.

4. Trumpeter Inn

Trumpeter Inn
Friday Harbor
United States
Nina
£191
includes taxes & fees
1 Oct - 2 Oct
Trumpeter Inn
A living room with a sofa, armchairs, a coffee table, and a fireplace.
A landscaped garden with neatly trimmed hedges, a white picket fence, and a wooden signboard.
A hotel lobby with a reception desk, seating area, and a view of the adjacent room.
A waterfront promenade with benches, a gazebo, and a large white boat docked at a pier.

5. Earthbox Inn & Spa

Earthbox Inn & Spa
Friday Harbor
United States
Ann
£192
includes taxes & fees
13 Oct - 14 Oct
Earthbox Inn & Spa
A wooden cabin interior with a dining table, chairs, and a bench.
A lodge with multiple cabins, a dock, and a surrounding forest.
A wooden deck with a table and chairs overlooking a marina with boats and a forested hillside.
A marina with boats docked, surrounded by forested hills and a small building complex.

6. Snug Harbor Resort

Snug Harbor Resort
Friday Harbor
United States
Patricia
£197
includes taxes & fees
19 Oct - 20 Oct
Snug Harbor Resort
A marina with boats, a cruise ship, and a forested island.
A white building with a balcony, potted plants, and a stone pathway.
A living room with a sectional sofa, a coffee table, a lamp, and a potted plant.
A kitchen with wooden cabinets, a built-in microwave, and a coffee station.

7. Bird Rock Hotel

Bird Rock Hotel
Friday Harbor
United States
Vanessa
£134
includes taxes & fees
13 Oct - 14 Oct
Bird Rock Hotel
A two-story house with a front porch, a picket fence, and a small garden area.
A garden with a wooden pergola, flowering plants, and a pathway leading to a house.
A cozy room with a wooden ceiling, a bed with a quilt, a sofa with cushions, a table with a board game, and a window with shutters.
A conservatory with a dining table set for four, surrounded by white chairs, and a lamp on the right.

8. Tucker House Inn

Tucker House Inn
Friday Harbor
United States
ZACHARY
£120
includes taxes & fees
1 Oct - 2 Oct
Tucker House Inn
A marina with boats docked in a structured layout, surrounded by water and a distant cityscape.
A serene lakeside setting with string lights, wicker chairs, and a fire pit area.
A hotel with a large building, a pond in front, and trees around.
A restaurant with tables set for dining, large windows offering a view of boats and greenery.

9. Roche Harbor Resort

Roche Harbor Resort
Friday Harbor
United States
Nicco
£174
includes taxes & fees
21 Oct - 22 Oct
Roche Harbor Resort
A two-story building with a covered porch, surrounded by a variety of flowering plants.
A living room with a grand piano, a fireplace, a sofa, and a chair.
A room with a bed, a TV, a table with chairs, a rug, and a balcony with chairs.
A dining room with a large wooden table surrounded by chairs, a patterned rug, and a cabinet with a mirror.

10. Friday Harbor Grand B&B

Friday Harbor Grand B&B
Friday Harbor
United States
Andrew
£222
includes taxes & fees
12 Oct - 13 Oct
Friday Harbor Grand B&B
View all properties

Find out more about San Juan Island

Discover cheap things to do in San Juan Island

San Juan Island offers a delightful mix of natural beauty and activities that won’t break the bank. Start your adventure at the stunning Lime Kiln Point State Park, renowned for its whale watching opportunities—spotting orcas here is a thrilling experience, and the park entrance is free! Next, explore the charming town of Friday Harbor, where you can wander through quaint shops and enjoy local art, all while soaking in the vibrant atmosphere without spending much. For those who love the outdoors, hiking the scenic trails at San Juan Island National Historical Park provides breathtaking views and a glimpse into the island's rich history, and it's completely free. Don’t miss the chance to visit the San Juan Island Farmers Market, where you can sample local produce and artisan goods, often at reasonable prices. Lastly, the peaceful beaches, like those at South Beach, offer a perfect spot for picnicking—bring your own food for an affordable day out. When it comes to accommodation, consider staying in the Friday Harbor area, where budget-friendly hotels provide easy access to these attractions. Many offer charming rooms and attentive service, allowing you to feel pampered while enjoying the convenience of being close to the island's highlights.

How to get cheap hotels in San Juan Island?

✅ The length of stay in San Juan Island often varies depending on the nature of the trip, but many travellers opt to stay for several days or up to a week to take in San Juan Island's notable landmarks and points of interest.

✅  If you're looking for cheap hotels in San Juan Island in 2026, book your hotel well in advance. Reserving your stay at least a few weeks or months ahead of time can help you take advantage of amazing rates on cheap hotels in San Juan Island, and if your plans change you can find many options of hotels with free cancelation.

✅  To find affordable hotels in San Juan Island on Expedia, start by entering your travel dates and the number of individuals in your group. Once you've provided this information, you can refine your search results by filtering for budget hotels in San Juan Island.

✅  Use the filtering tools offered by Expedia to refine your search results by location, price limits, amenities such as breakfast included, and other factors that matter to you. This will help you quickly locate the ideal budget-friendly hotel that fits your specific requirements.

✅  If you're looking to save money on a cheap hotel in San Juan Island, the ideal time to go is usually during the off-season in San Juan Island. On Expedia, you can find hotels from £75*.

✅  San Juan Island offers numerous budget-friendly attractions and activities for travellers, such as art and exhibits at free museums and galleries or exploring San Juan Island on foot.

✅  One of the best ways to find cheap hotels in San Juan Island is to search Expedia for properties that provide family-friendly accommodations and features such as activities and complimentary meals, and then sort these by price.

*Prices and availability are subject to change. Additional terms may apply.

Top San Juan Island Hotel Reviews

Auld Holland Inn

Auld Holland Inn

10/10 Excellent
"Hospitality is tested not when everything goes perfectly, but when travel plans go awry. Arriving in Oak Harbor, Washington at 1:00 a.m. usually guarantees a groggy reception, but at The Auld Holland Inn, it brought out the absolute best in Whidbey Island lodging. The owner/manager, Eric, accommodated our late arrival with a warmth and grace that immediately melted away our hours of travel fatigue. The properties that leave the most lasting impressions are those with distinct character. Our room was a beautifully preserved, classic retreat-spacious, immaculately clean, and radiating an old-world, Dutch-themed charm. Unlike many modern, sterile hotel chains where aesthetics overshadow functionality, everything here worked seamlessly. From the perfectly chilled refrigerator and microwave to the excellent water pressure in the hot shower, flat-screen TV, coffee maker, and powerful blow dryer, no detail was overlooked. To top it off, the bed offered pure, plush comfort that ensured a flawless night’s rest. The inn serves as an incredible base camp for exploring the Pacific Northwest, strategically located near Deception Pass State Park, Fort Ebey, and Fort Casey. Our island adventure eventually called us onward, cutting our four-day reservation short by one night to continue sightseeing further up the coast. Showing their true colors, management went above and beyond by gracefully refunding our final, unused night. I will return. I give them my highest possible recommendation!!!"
Ivan 4-night trip
Posted 6 hours ago
Auld Holland Inn

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