Search Lakeside Hotels in San Juan Islands

    price find illustration

    Change your mind

    Book hotels with free cancellation
    deals illustration

    Treat yourself

    Save instantly and earn perks with One Key
    Learn about One Key
    bed illustration

    Be picky

    Search almost a million properties worldwide

Check availability on San Juan Islands Lakeside Hotels

Top San Juan Islands Lakeside Hotels

Historic lodge, new wing, ocean-front, private beach, kayaks, hot tub, and more!
Cozy cabin interior with a comfortable seating area, dining table, and television.

Historic lodge, new wing, ocean-front, private beach, kayaks, hot tub, and more!

10.0 out of 10, Exceptional, (71)
"Wonderful location. Great amenities. New construction really well done."
Historic lodge, new wing, ocean-front, private beach, kayaks, hot tub, and more!
Lowest nightly price found within the past 24 hours based on a 1 night stay for 2 adults. Prices and availability subject to change. Additional terms may apply.

Frequently asked questions

Why book your lakeside hotel in San Juan Islands with Expedia?
Finding your perfect lakeside hotel in San Juan Islands is a cinch with Expedia. Getting away with the kids? Make use of our filters to search for stays with family-friendly amenities. If you have a budget in mind, click on how much you'd like to spend and the preferred star rating of your hotel. Whatever your waterside holiday plans, you'll always get the best deal possible.
How can I find cheap lakeside hotels in San Juan Islands?
Spend your holiday near the water without spending top dollar with Expedia. To find cheap lakeside hotels in San Juan Islands, use our filter tool to choose your budget and preferred star rating. Like to stay in a certain area? Our convenient "neighbourhood" filter will search for accommodation in your desired destination.