Search Hotels in Mission Bay, San Diego

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Our top choices for Mission Bay hotels

San Diego Mission Bay Resort

San Diego Mission Bay Resort
4.0 star property
Mission Bay
8.4 out of 10, Very good, (1,394 reviews)
"The restaurant on site was delicious "
United States
Blanca
The price is £243
includes taxes & fees
23 Apr - 24 Apr
San Diego Mission Bay Resort

Paradise Point Resort & Spa

Paradise Point Resort & Spa
4.0 star property
Mission Bay
8.8 out of 10, Excellent, (2,538 reviews)
"Great property with great food and lots to do. "
United States
GERALD
Paradise Point Resort & Spa

Hyatt Regency Mission Bay Spa and Marina

Hyatt Regency Mission Bay Spa and Marina
4.0 star property
Mission Bay
8.4 out of 10, Very good, (1,612 reviews)
"Beautiful hotel, friendly staff, very clean, lots to do, RedMarlin was great for breakfast. "
United States
Hanna
The price is £184
includes taxes & fees
10 May - 11 May
Hyatt Regency Mission Bay Spa and Marina

The Dana on Mission Bay

The Dana on Mission Bay
3.5 star property
Mission Bay
9.0 out of 10, Wonderful, (4,255 reviews)
"Dog friendly and excellent location. "
United States
Michael
The price is £187
includes taxes & fees
16 Apr - 17 Apr
The Dana on Mission Bay

Marriott Marquis San Diego Marina

Marriott Marquis San Diego Marina
4.0 star property
5.8 mi from Mission Bay
9.2 out of 10, Wonderful, (2,087 reviews)
"good atmosphere, good staff, friendly staff, good food, pool is amazing, restaurants are affordable and excellent."
United States
Artsrun
The price is £241
includes taxes & fees
24 Apr - 25 Apr
Marriott Marquis San Diego Marina

Best Western Americana Inn

Best Western Americana Inn
2.5 star property
17.8 mi from Mission Bay
9.0 out of 10, Wonderful, (1,254 reviews)
"Great place and service. Will definitely stay there again. "
United States
Maria
The price is £103
includes taxes & fees
19 Apr - 20 Apr
Best Western Americana Inn

Embassy Suites by Hilton San Diego La Jolla

Embassy Suites by Hilton San Diego La Jolla
4.0 star property
University City, 6.8 mi from Mission Bay
8.8 out of 10, Excellent, (1,909 reviews)
"Quick stay for one night and everything went very smoothly"
United States
Christopher
The price is £197
includes taxes & fees
19 Apr - 20 Apr
Embassy Suites by Hilton San Diego La Jolla

Hampton Inn San Diego-Kearny Mesa

Hampton Inn San Diego-Kearny Mesa
2.5 star property
6.1 mi from Mission Bay
9.2 out of 10, Wonderful, (1,008 reviews)
"The rooms was a nice size and clean. The staff was nice and their breakfast was better than expected. "
United States
elisa
The price is £131
includes taxes & fees
12 Apr - 13 Apr
Hampton Inn San Diego-Kearny Mesa

Best Western Plus Marina Gateway Hotel

Best Western Plus Marina Gateway Hotel
3.5 star property
10.4 mi from Mission Bay
9.2 out of 10, Wonderful, (3,772 reviews)
"Great hotel"
United States
Deante
The price is £122
includes taxes & fees
12 Apr - 13 Apr
Best Western Plus Marina Gateway Hotel

Holiday Inn Express San Diego South - Chula Vista by IHG

Holiday Inn Express San Diego South - Chula Vista by IHG
2.5 star property
12 mi from Mission Bay
9.4 out of 10, Exceptional, (1,088 reviews)
"Room was clean, amenities were stocked, breakfast was yummy. I would definitely stay there again."
United States
Fabiola
The price is £106
includes taxes & fees
10 May - 11 May
Holiday Inn Express San Diego South - Chula Vista by IHG

Sheraton San Diego Resort

Sheraton San Diego Resort
4.0 star property
3.7 mi from Mission Bay
8.4 out of 10, Very good, (3,457 reviews)
"Nice hotel with great location "
United States
DIANA
The price is £176
includes taxes & fees
7 May - 8 May
Sheraton San Diego Resort

Hampton Inn & Suites San Diego Airport Liberty Station

Hampton Inn & Suites San Diego Airport Liberty Station
2.5 star property
3.3 mi from Mission Bay
9.2 out of 10, Wonderful, (1,712 reviews)
"Great location for the airport stay"
United States
Christopher
The price is £146
includes taxes & fees
26 Apr - 27 Apr
Hampton Inn & Suites San Diego Airport Liberty Station

SpringHill Suites by Marriott Chula Vista Eastlake

SpringHill Suites by Marriott Chula Vista Eastlake
3.5 star property
17.7 mi from Mission Bay
9.6 out of 10, Exceptional, (622 reviews)
"By far, one of the best hotels we have stayed at! Very clean, friendly and knowledgeable front desk staff, amenities galore and right across the street from family friendly entertainment venues like play city and ninja factory. The pool was amazing - we had all a great time! "
United States
Daniel
The price is £154
includes taxes & fees
3 May - 4 May
SpringHill Suites by Marriott Chula Vista Eastlake

HYATT house San Diego/Sorrento Mesa

HYATT house San Diego/Sorrento Mesa
3.0 star property
8.7 mi from Mission Bay
9.0 out of 10, Wonderful, (1,001 reviews)
"Enjoyed our stay very much "
United States
Peggy Sue
The price is £130
includes taxes & fees
3 May - 4 May
HYATT house San Diego/Sorrento Mesa

Wyndham Garden San Diego Near SeaWorld

Wyndham Garden San Diego Near SeaWorld
3.0 star property
1.6 mi from Mission Bay
7.4 out of 10, Good, (4,233 reviews)
"great place"
Canada
souheil
The price is £84
includes taxes & fees
12 Apr - 13 Apr
Wyndham Garden San Diego Near SeaWorld

Wyndham San Diego Bayside

Wyndham San Diego Bayside
4.0 star property
4.9 mi from Mission Bay
8.4 out of 10, Very good, (6,140 reviews)
"Clean room and great location "
United States
Evanthia
The price is £165
includes taxes & fees
3 May - 4 May
Wyndham San Diego Bayside

Embassy Suites by Hilton San Diego Bay Downtown

Embassy Suites by Hilton San Diego Bay Downtown
4.0 star property
5.4 mi from Mission Bay
9.0 out of 10, Wonderful, (1,721 reviews)
"Wonderful hotel and great location!! "
United States
Jan
The price is £223
includes taxes & fees
10 May - 11 May
Embassy Suites by Hilton San Diego Bay Downtown

Old Town Inn

Old Town Inn
2.5 star property
2.2 mi from Mission Bay
9.2 out of 10, Wonderful, (1,853 reviews)
"Nice hotel, would stay here again. "
United States
Samantha
The price is £142
includes taxes & fees
12 Apr - 13 Apr
Old Town Inn

Bahia Resort Hotel

Bahia Resort Hotel
3.5 star property
Central Mission Beach, 1.4 mi from Mission Bay
8.6 out of 10, Excellent, (1,971 reviews)
"We stay here a few times a year normally and love the location. "
United States
Lindsay
The price is £274
includes taxes & fees
17 Apr - 18 Apr
Bahia Resort Hotel

Holiday Inn Express San Diego Airport - Old Town by IHG

Holiday Inn Express San Diego Airport - Old Town by IHG
2.5 star property
3 mi from Mission Bay
9.2 out of 10, Wonderful, (1,066 reviews)
"Clean room, friendly staff, and only a 15 minute walk to Old Town. Also conveniently located close to the airport just a short shuttle drive away. "
United States
Olivia
The price is £120
includes taxes & fees
26 Apr - 27 Apr
Holiday Inn Express San Diego Airport - Old Town by IHG
Lowest nightly price found within the past 24 hours based on a 1 night stay for 2 adults. Prices and availability subject to change. Additional terms may apply.

Where to stay in Mission Bay

Find the best Mission Bay areas for the activities you enjoy most.

Downtown San Diego

Known for its fantastic nightlife, fascinating museums and beautiful waterfront views, there's plenty to explore in Downtown San Diego. Top attractions like Petco Park and Port of San Diego are major draws. Catch the metro at Civic Center Station or Civic Center Station to see more of the city.

Pacific Beach

Relax in beachside cafés in the morning, surf clean breaks in the afternoon and dance with a youthful club crowd at night at this coastal San Diego strip.

Mission Beach

If you're spending some time in Mission Beach, Mission Bay and Mission Beach are top sights worth seeing.

Gaslamp Quarter

San Diego’s historic heart has shed its seedy past to emerge as one of the city’s premier dining, shopping and entertainment hubs.

Ocean Beach

Ocean Beach is beloved for its stunning beaches. Take some time to explore sights in the area like Dog Beach and Sunset Cliffs Natural Park.

Top Mission Bay Hotel Reviews

Frequently asked questions

What is Mission Bay like?
You'll be sure to have fun exploring San Diego's Mission Bay neighbourhood. Looking for sights you might find in a travel guide about Mission Bay? Consider a visit to Mission Bay while you're in the neighbourhood.
What's a favourite hotel to stay in Mission Bay?
Based on our traveller data, Paradise Point Resort & Spa is one of the top choices for your stay in Mission Bay. This resort offers a marina and 5 outdoor pools. Other good options for your stay in the neighbourhood include The Dana on Mission Bay and San Diego Mission Bay Resort.
How many hotels should I expect to find in the Mission Bay area?
If you're searching for places to stay in San Diego, Expedia has something to meet your needs with 46 Mission Bay hotels and other accommodation options to choose from.
If I need to cancel my hotel reservation in Mission Bay, will I receive a refund?
Yes, you'll find most room reservations are refundable provided that you cancel before the accommodation's cancellation deadline, which is usually within 24-48 hours of the scheduled arrival. If you booked a non-refundable reservation, you might be able to still cancel and be given a refund within a 24-hour period of your booking. Add your dates and click on "Search", then you can use the "fully refundable" filter to view top deals in Mission Bay.
What is there to do around this San Diego neighbourhood?
Enjoy a stroll along the shore at Mission and Pacific Beaches, Ski Beach and Crown Point Shores while you're in Mission Bay. You could also plan a visit to Mission Bay or Mission Bay Golf Course while you're in the neighbourhood. Mission Beach, North Cove Beach and Bahia Point Beach are just a few of the places to visit in and around Mission Bay. When you're sightseeing in San Diego, Bay City Brewing Co. and Sail Bay are also worth a stop.