The Best Hotels Closest to San Diego Botanic Garden in Encinitas - 2026 Updated Prices

Our top choices for San Diego Botanic Garden hotels

Couples treatment room(s), hot stone massages, deep-tissue massages

1. Twelve Senses Retreat

1 mi from San Diego Botanic Garden

Jacklyn

includes taxes & fees

13 Jul - 14 Jul

2. Inn at Moonlight Beach

Downtown Encinitas, 0.8 mi from San Diego Botanic Garden

Cesar

includes taxes & fees

15 Jul - 16 Jul

Room, 2 Double Beds, Non Smoking | Free WiFi, bed sheets, alarm clocks

3. Brisa Pacific Hotel Encinitas

Downtown Encinitas, 1.1 mi from San Diego Botanic Garden

Ellie

includes taxes & fees

30 Jun - 1 Jul

4. The Encinitan Hotel & Suites

Downtown Encinitas, 0.7 mi from San Diego Botanic Garden

joshua

includes taxes & fees

20 Jul - 21 Jul

5. Hampton Inn Cardiff Beach Encinitas, CA Near Del Mar

1.8 mi from San Diego Botanic Garden

Michael

includes taxes & fees

2 Jul - 3 Jul

Standard Room, 2 Double Beds, Non Smoking | Pillow-top beds, in-room safe, desk, laptop workspace

6. Comfort Inn Encinitas Near Legoland

Leucadia, 1 mi from San Diego Botanic Garden

Sue

includes taxes & fees

13 Jul - 14 Jul

Premium bedding, down duvets, pillow-top beds, in-room safe

7. Alila Marea Beach Resort Encinitas, a Hyatt Luxury Resort

2.6 mi from San Diego Botanic Garden

Karriem

includes taxes & fees

1 Jul - 2 Jul

8. Four Seasons Residence Club Aviara, North San Diego

3.2 mi from San Diego Botanic Garden

Greg

includes taxes & fees

28 Jun - 29 Jun

2 outdoor pools, pool cabanas (surcharge), pool umbrellas

9. Park Hyatt Aviara Resort, Golf Club & Spa

3.5 mi from San Diego Botanic Garden

Daniel

includes taxes & fees

30 Jun - 1 Jul

8 outdoor pools, open 8:00 AM to 10:00 PM, pool cabanas (surcharge)

10. Omni La Costa Resort & Spa Carlsbad

2.8 mi from San Diego Botanic Garden

sonia

includes taxes & fees

30 Jun - 1 Jul

11. Motel 6 Carlsbad, CA Beach

4 mi from San Diego Botanic Garden

luke

includes taxes & fees

30 Jun - 1 Jul

12. Inn At Rancho Santa Fe

4.9 mi from San Diego Botanic Garden

Mary

includes taxes & fees

19 Jul - 20 Jul

13. Home2 Suites by Hilton Carlsbad

4.7 mi from San Diego Botanic Garden

Ann

includes taxes & fees

5 Jul - 6 Jul

14. Days Inn by Wyndham San Diego Vista

8.7 mi from San Diego Botanic Garden

Brent

includes taxes & fees

29 Jun - 30 Jun

2 outdoor pools, pool umbrellas, pool loungers

15. Carlsbad Seapointe Resort

4.7 mi from San Diego Botanic Garden

Dustin

includes taxes & fees

28 Jun - 29 Jun

16. Courtyard by Marriott San Diego Carlsbad

4.7 mi from San Diego Botanic Garden

Ramona

includes taxes & fees

28 Jun - 29 Jun

17. Holiday Inn Carlsbad by IHG

5.4 mi from San Diego Botanic Garden

Maria Cristina

includes taxes & fees

5 Jul - 6 Jul

18. Best Western Carlsbad by the Sea

4.1 mi from San Diego Botanic Garden

Sergio

includes taxes & fees

30 Jun - 1 Jul

19. Residence Inn by Marriott Carlsbad

5.6 mi from San Diego Botanic Garden

includes taxes & fees

29 Jun - 30 Jun

Standard Room, 1 Queen Bed, Non Smoking | Desk, blackout curtains, free WiFi, bed sheets

20. Franciscan Inn

10 mi from San Diego Botanic Garden

Tom

includes taxes & fees

29 Jun - 30 Jun

View all properties

Compare popular hotels close to San Diego Botanic Garden

Property	Property class	Guest rating
Twelve Senses Retreat	3.0 star property	9.8 Exceptional 36 reviews	View
Inn at Moonlight Beach	3.5 star property	9.6 Exceptional 138 reviews	View
Brisa Pacific Hotel Encinitas	2.0 star property	8.8 Excellent 1,003 reviews	View
The Encinitan Hotel & Suites	3.0 star property	8.2 Very good 1,575 reviews	View
Hampton Inn Cardiff Beach Encinitas, CA Near Del Mar	3.0 star property	9.2 Wonderful 1,042 reviews	View

Top San Diego Botanic Garden Hotel Reviews

Comfort Inn Encinitas Near Legoland

8/10 Good

"The room was great and so was the breakfast. It was perfect for our stay. My only complaint was the jacuzzi was stained and dirty."

Omni La Costa Resort & Spa Carlsbad

8/10 Good

"We love this resort for the last 15 years. Everything is so beautiful there and the spa is a once in a lifetime experience. On our last stay we were disappointed to always be redirected to different departments for help. We eventually insisted that staff pick up their phones and request help instead of outsourcing us and making us walk everywhere for simple requests."

Inn at Moonlight Beach

10/10 Excellent

"If you’re looking for a peaceful getaway with not a lot of people and kids running around (besides the train every now and then during the day. lol) This is it. It’s a cute intimate staycation. The massage I got for my husband he loved and the footsoak in the garden with wine and cheese board was perfect. I even fell asleep in the garden waiting for my husband to finish his massage. The staff are super attentive and make you feel so welcomed. We satyed in the sage room and slept like babies. I loved everything about our stay. And enjoyed the simplicity of it all."

Hampton Inn Cardiff Beach Encinitas, CA Near Del Mar

10/10 Excellent

"Came here for a little weekend getaway with my wife. Room was very clean and exceeded our expectations. Staff was very helpful and friendly when checking in. Locations is very close to everything you’d need. About 5-10 min from nice beaches and about 20-25 min from Downtown SD. Didn’t get to try out the breakfast provided or the pool area. Overall a great experience and would book again."

Hotels near other San Diego Botanic Garden attractions

A sandy beach with gentle waves lapping at the shore, a clear sky, and a rocky cliff with buildings on top.

Moonlight State Beach

9.2/5 (544 reviews)

Why not spend a care-free afternoon at Moonlight State Beach during your travels in Encinitas? Discover the sunsets and seafood restaurants in this walkable area.

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Frequently asked questions

What's the area like around San Diego Botanic Garden?

San Diego Botanic Garden is located in a family-friendly area of Encinitas known for its beautiful beaches and surfing. If you're looking for a convenient place to stay, take a look at the 77 hotels and other accommodation options you'll find within a mile.

What's the best place to stay close to San Diego Botanic Garden?

The Encinitan Hotel & Suites is one of the top choices for your stay based on our traveller data, and this hotel offers free breakfast and an outdoor pool. It's located just a short 0.7 mi (1.1 km) from San Diego Botanic Garden. Other good choices close by include Days Inn by Wyndham Encinitas Moonlight Beach and Moonlight Beach Motel.

How many hotels can I expect to find close to San Diego Botanic Garden?

Expedia has 77 hotels and other accommodation options within a mile from San Diego Botanic Garden.

If I need to cancel the hotel reservation for my stay near San Diego Botanic Garden, will I receive a refund?

Yes, the majority of hotel room reservations are fully refundable if cancelled before the hotel's cancellation deadline, which is often 24 or 48 hours before your scheduled arrival. If you have a reservation that's non-refundable, you might be able to still cancel and get a refund within 24 hours of booking. Enter dates in and click on "Search", then use the "fully refundable" filter to get the top deals on offer near San Diego Botanic Garden.

What can I see and do near San Diego Botanic Garden?

You can enjoy live performances at Belly Up and North Coast Repertory Theatre. Spend some time wandering around San Elijo State Beach, Encinitas Community Park and Poinsettia Park. Moonlight State Beach, South Carlsbad State Beach and Solana Beach are great spots if you want to spend some time by the water during your stay.

Search Hotels Near San Diego Botanic Garden, Encinitas

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Our top choices for San Diego Botanic Garden hotels

1. Twelve Senses Retreat

2. Inn at Moonlight Beach

3. Brisa Pacific Hotel Encinitas

4. The Encinitan Hotel & Suites

5. Hampton Inn Cardiff Beach Encinitas, CA Near Del Mar

6. Comfort Inn Encinitas Near Legoland

7. Alila Marea Beach Resort Encinitas, a Hyatt Luxury Resort

8. Four Seasons Residence Club Aviara, North San Diego

9. Park Hyatt Aviara Resort, Golf Club & Spa

10. Omni La Costa Resort & Spa Carlsbad

11. Motel 6 Carlsbad, CA Beach

12. Inn At Rancho Santa Fe

13. Home2 Suites by Hilton Carlsbad

14. Days Inn by Wyndham San Diego Vista

15. Carlsbad Seapointe Resort

16. Courtyard by Marriott San Diego Carlsbad

17. Holiday Inn Carlsbad by IHG

18. Best Western Carlsbad by the Sea

19. Residence Inn by Marriott Carlsbad

20. Franciscan Inn

Compare popular hotels close to San Diego Botanic Garden

Top San Diego Botanic Garden Hotel Reviews

Comfort Inn Encinitas Near Legoland

Hotels near other San Diego Botanic Garden attractions

Moonlight State Beach

Frequently asked questions